Center                  Preprocessing - Center gene expression data
Inference               Postprocessing - Posterior Inference
InferenceA              Postprocessing - Inference on the transition
                        matrix
InferenceMu             Postprocessing - Inference on the vector of
                        state specific mean
InferenceR              Postprocessing - Inference on the association
                        matrix
InferenceSd             Postprocessing - Inference on the vector of
                        state specific sd
InferenceXi             Postprocessing - Inference on the latent states
InitMu                  Preprocessing - Initialize state specific mean
                        vector
InitXi                  Preprocessing - Initialize matrix of latent
                        states
NCI_60                  NCI-60 cancer cell lines data
RListToVector           Internal function
Scenario1               Simulated data - Scenario 1
Scenario2               Simulated data - Scenario 2
TCGA_lung               TCGA lung squamous cell carcinoma data
Tran                    Preprocessing - Tran
iBAT                    Main - Mixture selection prior
iBATCGH-package         Integrative Bayesian Analysis of Transcriptomic
                        and CGH data
iBATProbit              Main - Probit selection prior
