Statistical Tools for Filebacked Big Matrices

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Documentation for package ‘bigstatsr’ version 0.2.3

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bigstatsr-package bigstatsr: Statistical Tools for Filebacked Big Matrices
add_code256 Class FBM.code256
asPlotlyText Plotly text
AUC AUC
AUCBoot AUC
bigstatsr bigstatsr: Statistical Tools for Filebacked Big Matrices
big_apply Split-Apply-Combine
big_CMSA Cross-Model Selection and Averaging.
big_colstats Standard univariate statistics
big_copy Copy a Filebacked Big Matrix
big_cor Correlation
big_counts Counts
big_cprodMat Cross-product with a matrix
big_cprodVec Cross-product with a vector
big_crossprodSelf Crossprod
big_parallelize Split-parApply-Combine
big_prodMat Product with a matrix
big_prodVec Product with a vector
big_randomSVD Randomized partial SVD
big_read Read a file
big_scale Some scaling functions
big_spLinReg Sparse linear regression
big_spLogReg Sparse logistic regression
big_spSVM Sparse SVM
big_SVD Partial SVD
big_tcrossprodSelf Tcrossprod
big_transpose Transposition
big_univLinReg Column-wise linear regression
big_univLogReg Column-wise logistic regression
block_size Determine a correct value for the block.size parameter
dim-method Methods for the FBM class
Extract Create an Implementation of [ For Custom Matrix-Like Types
FBM Class FBM
FBM-class Class FBM
FBM-methods Methods for the FBM class
FBM.code256 Class FBM.code256
FBM.code256-class Class FBM.code256
FBM.code256-methods Methods for the FBM.code256 class
FBM.code256_RC Class FBM.code256
FBM_RC Class FBM
length-method Methods for the FBM class
nb_cores Recommended number of cores to use
pasteLoc Get coordinates
plot.big_SVD Plot method
plot.mhtest Plot method
predict.big_CMSA Predict method
predict.big_sp Predict method
predict.big_SVD Scores of PCA
predict.mhtest Predict method
Replace Create an Implementation of [<- For Custom Matrix-Like Types
typeof-method Methods for the FBM class
[-method Methods for the FBM class
[-method Methods for the FBM.code256 class
[<--method Methods for the FBM class