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| AvgCorr | Average Correlation Estimate. |
| BAT | Basic Association Test |
| BootCorr | Bootstrap Correlation Estimate. |
| DINT | Direct-INT |
| fastDet | Matrix Determinant |
| fastInv | Matrix Inverse |
| fastIP | Matrix Inner Product |
| fastMMp | Matrix matrix product |
| fastMvp | Matrix vector product |
| fastT | Matrix Transpose |
| fitNorm | Normal Model |
| G | Simulated Genotypes |
| IINT | Indirect-INT |
| IINT0 | Indirect-INT, Without Secondary Adjustment |
| inCheck | Input Check |
| incP | Incomplete projection |
| matQF | Matrix Quadratic Form |
| OmniP | Omnibus P-value |
| rankNormal | Rank-Normalize |
| RNOmni | Rank-Normal Omnibus Test |
| S | Population Structure Adjustments |
| SchurC | Schur complement |
| vecCor | Correlation |
| vecQF | Quadratic Form |
| X | Simulated Covariates |
| Y | Simulated Phenotypes |