Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions

[Up] [Top]

Documentation for package ‘MLML2R’ version 0.2.0

Help Pages

MethylatedBS_sim Methylated counts from BS
MethylatedOxBS_sim Methylated counts from oxBS
MethylatedTAB_sim Methylated counts from TAB
MLML MLE (maximum likelihood estimates) of 5-mC and 5-hmC levels.
UnMethylatedBS_sim Unmethylated counts from BS
UnMethylatedOxBS_sim Unmethylated counts from oxBS
UnMethylatedTAB_sim Unmethylated counts from TAB