Package: yCrypticRNAs
Type: Package
Title: Cryptic Transcription Analysis in Yeast
Version: 0.99.2
Author: Nicole Uwimana, Benjamin Haibe-Kains, Francois Robert
Maintainer: Nicole Uwimana <nicole.uwimana@gmail.com>
Description: Calculates cryptic scores for genes using the ratio
    (Cheung et al., 2008), the 3' enrichment method
    (DeGennaro et al., 2013) and the probabilistic
    method. It also provide	methods to estimates
    cryptic transcription start sites.
Depends: R (>= 3.2.0)
URL: https://bitbucket.org/nuwimana/ycrypticrnas
BugReports: https://bitbucket.org/nuwimana/ycrypticrnas/issues
License: GPL-2
LazyData: true
Imports: biomaRt (>= 2.24.1), data.table (>= 1.9.6), IRanges (>=
        2.2.9), mclust (>= 5.1), MESS (>= 0.3-2), parallel (>= 3.2.2),
        Rcpp (>= 0.12.1), Rsamtools(>= 1.20.5)
Suggests: knitr, testthat, rmarkdown
VignetteBuilder: knitr
LinkingTo: Rcpp
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-02-08 18:37:38 UTC; nicoleuwimana
Repository: CRAN
Date/Publication: 2016-02-08 23:43:06
Built: R 3.2.5; x86_64-w64-mingw32; 2017-04-20 07:58:04 UTC; windows
Archs: i386, x64
