# Streamline Bioacoustic Analysis

## Documentation for package ‘warbleR’ version 1.1.6

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

warbleR-package | warbleR: A package to streamline bioacoustic analysis
autodetec | Automatically detect vocalizations in sound files
catalog | Create catalog of vocal signals
catalog2pdf | 'catalog2pdf' combines 'catalog' images into pdfs
checksels | Check selection data frames
checkwavs | Check .wav files
compare.methods | Assessing the performance of acoustic distance measurements
coor.graph | Coordinated singing graphs
coor.test | Randomization test for singing coordination
Cryp.soui | Acoustic recording of _Crypturellus soui_ (Little Tinamou).
dfDTW | Acoustic dissimilarity using dynamic time warping on dominant frequency contours
dfts | Extract the dominant frequency values as a time series
ffDTW | Acoustic dissimilarity using dynamic time warping on fundamental frequency contours
ffts | Extract the fundamental frequency values as a time series
filtersels | Subset selection data frames based on manually filtered image files
fixwavs | Fix .wav files to allow importing them into R
imp.raven | Import Raven selections
imp.syrinx | Import Syrinx selections
lspec | Create long spectrograms of whole sound files
lspec2pdf | 'lspec2pdf' combines 'lspec' images in .jpeg format to a single pdf file.
manualoc | Interactive view of spectrograms
mp32wav | Convert .mp3 files to .wav
Phae.long1 | Audio recording #1 of _Phaethornis longirostris_
Phae.long2 | Audio recording #2 of _Phaethornis longirostris_
Phae.long3 | Audio recording #3 of _Phaethornis longirostris_
Phae.long4 | Audio recording #1 of _Phaethornis longirostris_
querxc | Access Xeno-Canto recordings and metadata
selec.table | Data frame of selections (i.e. selection table).
selection.files | Selections files from Raven and Syrinx.
seltailor | Interactive view of spectrograms to tailor start and end of selections
sig2noise | Measure signal-to-noise ratio
sim.coor.sing | Simulated coordinated singing events.
snrspecs | Spectrograms with background noise margins
sp.en.ts | Extract the spectral entropy across signals as a time series
specan | Measure acoustic parameters in batches of sound files
specreator | Spectrograms of selected signals
trackfreqs | Spectrograms with frequency measurements
warbleR | warbleR: A package to streamline bioacoustic analysis
wavdur | Measure the duration of sound files
xcmaps | Maps of Xeno-Canto recordings by species
xcorr | Spectrogram cross-correlation
xcorr.graph | Pairwise plots of spectrogram cross-correlation scores