Bayesian Applied Regression Modeling via Stan

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Documentation for package ‘rstanarm’ version 2.15.2

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A B C D E F H K L M N P R S T U V W

rstanarm-package Applied Regression Modeling via RStan

-- A --

adapt_delta Target average acceptance probability
as.array.stanreg Extract the posterior sample
as.data.frame.stanreg Extract the posterior sample
as.data.frame.summary.stanreg Summary method for stanreg objects
as.matrix.stanreg Extract the posterior sample

-- B --

bball1970 Datasets for rstanarm examples
bball2006 Datasets for rstanarm examples

-- C --

cauchy Prior distributions and options
coef.stanreg Methods for stanreg objects
compare_models Information criteria and cross-validation
confint.stanreg Methods for stanreg objects

-- D --

decov Prior distributions and options
dirichlet Prior distributions and options

-- E --

example_model Example model
exponential Prior distributions and options

-- F --

fitted.stanreg Methods for stanreg objects
fixef Methods for stanreg objects
fixef.stanreg Methods for stanreg objects

-- H --

hs Prior distributions and options
hs_plus Prior distributions and options

-- K --

kfold Information criteria and cross-validation
kidiq Datasets for rstanarm examples

-- L --

laplace Prior distributions and options
lasso Prior distributions and options
launch_shinystan Using the ShinyStan GUI with rstanarm models
log_lik Pointwise log-likelihood matrix
log_lik.stanreg Pointwise log-likelihood matrix
loo Information criteria and cross-validation
loo.stanreg Information criteria and cross-validation
loo_linpred Compute weighted expectations using LOO
loo_linpred.stanreg Compute weighted expectations using LOO
loo_predict Compute weighted expectations using LOO
loo_predict.stanreg Compute weighted expectations using LOO
loo_predictive_interval Compute weighted expectations using LOO
loo_predictive_interval.stanreg Compute weighted expectations using LOO

-- M --

mortality Datasets for rstanarm examples

-- N --

neg_binomial_2 Family function for negative binomial GLMs
ngrps Methods for stanreg objects
ngrps.stanreg Methods for stanreg objects
nobs.stanreg Methods for stanreg objects
normal Prior distributions and options

-- P --

pairs.stanreg Pairs method for stanreg objects
pairs_condition Pairs method for stanreg objects
pairs_style_np Pairs method for stanreg objects
plot.stanreg Plot method for stanreg objects
plot_nonlinear Bayesian generalized linear additive models with group-specific terms via Stan
posterior_interval Posterior uncertainty intervals
posterior_interval.stanreg Posterior uncertainty intervals
posterior_linpred Posterior distribution of the linear predictor
posterior_linpred.stanreg Posterior distribution of the linear predictor
posterior_predict Draw from posterior predictive distribution
posterior_predict.stanreg Draw from posterior predictive distribution
posterior_vs_prior Juxtapose prior and posterior
posterior_vs_prior.stanreg Juxtapose prior and posterior
pp_check Graphical posterior predictive checks
pp_check.stanreg Graphical posterior predictive checks
pp_validate Model validation via simulation
predict.stanreg Predict method for stanreg objects
predictive_error In-sample or out-of-sample predictive errors
predictive_error.ppd In-sample or out-of-sample predictive errors
predictive_error.stanreg In-sample or out-of-sample predictive errors
predictive_interval Predictive intervals
predictive_interval.ppd Predictive intervals
predictive_interval.stanreg Predictive intervals
print.stanreg Print method for stanreg objects
print.summary.stanreg Summary method for stanreg objects
priors Prior distributions and options
prior_options Deprecated functions
prior_summary Summarize the priors used for an rstanarm model
prior_summary.stanreg Summarize the priors used for an rstanarm model
product_normal Prior distributions and options

-- R --

R2 Prior distributions and options
radon Datasets for rstanarm examples
ranef Methods for stanreg objects
ranef.stanreg Methods for stanreg objects
residuals.stanreg Methods for stanreg objects
roaches Datasets for rstanarm examples
rstanarm Applied Regression Modeling via RStan
rstanarm-datasets Datasets for rstanarm examples
rstanarm-deprecated Deprecated functions

-- S --

se.stanreg Methods for stanreg objects
shinystan Using the ShinyStan GUI with rstanarm models
sigma Methods for stanreg objects
sigma.stanreg Methods for stanreg objects
stanreg-methods Methods for stanreg objects
stanreg-objects Fitted model objects
stan_aov Bayesian regularized linear models via Stan
stan_betareg Bayesian beta regression models via Stan
stan_betareg.fit Bayesian beta regression models via Stan
stan_biglm Bayesian regularized linear but big models via Stan
stan_biglm.fit Bayesian regularized linear but big models via Stan
stan_gamm4 Bayesian generalized linear additive models with group-specific terms via Stan
stan_glm Bayesian generalized linear models via Stan
stan_glm.fit Bayesian generalized linear models via Stan
stan_glm.nb Bayesian generalized linear models via Stan
stan_glmer Bayesian generalized linear models with group-specific terms via Stan
stan_glmer.nb Bayesian generalized linear models with group-specific terms via Stan
stan_lm Bayesian regularized linear models via Stan
stan_lm.fit Bayesian regularized linear models via Stan
stan_lm.wfit Bayesian regularized linear models via Stan
stan_lmer Bayesian generalized linear models with group-specific terms via Stan
stan_polr Bayesian ordinal regression models via Stan
stan_polr.fit Bayesian ordinal regression models via Stan
student_t Prior distributions and options
summary.stanreg Summary method for stanreg objects

-- T --

tumors Datasets for rstanarm examples

-- U --

update.stanreg Methods for stanreg objects

-- V --

VarCorr Methods for stanreg objects
VarCorr.stanreg Methods for stanreg objects
vcov.stanreg Methods for stanreg objects

-- W --

waic Information criteria and cross-validation
waic.stanreg Information criteria and cross-validation
wells Datasets for rstanarm examples