addMonitors	MCMCconf-class
addMonitors2	MCMCconf-class
addSampler	MCMCconf-class
array	nimArray
as.matrix.modelValuesBaseClass-Class	nimble-internal
asCol	asRow
asRow	asRow
autoBlock	autoBlock
autoBlockClass-Class	nimble-internal
BUGScontextClass-Class	nimble-internal
BUGSdeclClass	BUGSdeclClass-class
BUGSdeclClass-class	BUGSdeclClass-class
BUGSsingleContextClass-Class	nimble-internal
buildAuxiliaryFilter	buildAuxiliaryFilter
buildBootstrapFilter	buildBootstrapFilter
buildEnsembleKF	buildEnsembleKF
buildLiuWestFilter	buildLiuWestFilter
buildMCEM	buildMCEM
buildMCMC	buildMCMC
calcNodes	simNodes
calcNodesMV	simNodesMV
calculate	nodeFunctions
calculateDiff	nodeFunctions
calc_dmnormAltParams	nimble-internal
calc_dmnormConjugacyContributions	nimble-internal
Categorical	Categorical
checkConjugacy	modelBaseClass-class
checkInterrupt	checkInterrupt
cloglog	nimble-math
CmodelBaseClass	CmodelBaseClass-class
CmodelBaseClass-class	CmodelBaseClass-class
CmultiNimbleFunctionClass-Class	nimble-internal
CnimbleFunctionBase	CnimbleFunctionBase-class
CnimbleFunctionBase-class	CnimbleFunctionBase-class
codeBlockClass	codeBlockClass-class
codeBlockClass-class	codeBlockClass-class
combine_MCMC_comparison_results	combine_MCMC_comparison_results
compareMCMCs	compareMCMCs
compileNimble	compileNimble
configureMCMC	configureMCMC
conjugacyClass-Class	nimble-internal
conjugacyRelationshipsClass-Class	nimble-internal
Constraint	Constraint
cppBUGSmodelClass-Class	nimble-internal
cppCodeFileClass-Class	nimble-internal
cppCPPfileClass-Class	nimble-internal
cppHfileClass-Class	nimble-internal
cppModelValuesClass-Class	nimble-internal
cppNamedObjectsClass-Class	nimble-internal
cppNimbleFunctionClass-Class	nimble-internal
cppProjectClass-Class	nimble-internal
cppVirtualNimbleFunctionClass-Class	nimble-internal
crossLevel	samplers
cube	nimble-math
dcat	Categorical
dconstraint	Constraint
ddirch	Dirichlet
decide	decide
decideAndJump	decideAndJump
declare	declare
dependentClass-Class	nimble-internal
deregisterDistributions	deregisterDistributions
dexp_nimble	Exponential
dinterval	Interval
Dirichlet	Dirichlet
dirichlet	Dirichlet
distClass-Class	nimble-internal
distributionInfo	distributionInfo
distributionsClass-Class	nimble-internal
dmnorm_chol	MultivariateNormal
dmulti	Multinomial
dmvt_chol	Multivariate-t
dt_nonstandard	t
dwish_chol	Wishart
expit	nimble-math
Exponential	Exponential
exprClass-Class	nimble-internal
exprTypeInfoClass-Class	nimble-internal
getBound	getBound
getBUGSexampleDir	getBUGSexampleDir
getDefinition	getDefinition
getDependencies	modelBaseClass-class
getDimension	modelBaseClass-class
getDistribution	modelBaseClass-class
getDistributionInfo	distributionInfo
getLoadingNamespace	getLoadingNamespace
getLogProb	nodeFunctions
getLogProbNodes	simNodes
getLogProbNodesMV	simNodesMV
getMonitors	MCMCconf-class
getNimbleOption	getNimbleOption
getNimbleProject	nimble-internal
getNodeFunctionIndexedInfo	nimble-internal
getNodeNames	modelBaseClass-class
getParam	getParam
getParamNames	distributionInfo
getSamplers	MCMCconf-class
getsize	getsize
getType	distributionInfo
getVarNames	modelBaseClass-class
icloglog	nimble-math
identityMatrix	identityMatrix
ilogit	nimble-math
indexedNodeInfoTableClass-Class	nimble-internal
initializeModel	initializeModel
inprod	nimble-math
integer	nimInteger
Interval	Interval
inverse	nimble-math
iprobit	nimble-math
is.nf	is.nf
isBinary	modelBaseClass-class
isData	modelBaseClass-class
isDeterm	modelBaseClass-class
isDiscrete	modelBaseClass-class
isEndNode	modelBaseClass-class
isStoch	modelBaseClass-class
isTruncated	modelBaseClass-class
isUnivariate	modelBaseClass-class
isUserDefined	distributionInfo
keywordInfoClass-Class	nimble-internal
logdet	nimble-math
logfact	nimble-math
loggam	nimble-math
logit	nimble-math
makeBoundInfo	makeBoundInfo
MakeCustomModelClass-Class	nimble-internal
makeCustomModelValuesClass-Class	nimble-internal
makeParamInfo	makeParamInfo
make_MCMC_comparison_pages	make_MCMC_comparison_pages
mapsClass-Class	nimble-internal
matrix	nimMatrix
MCMCconf	MCMCconf-class
MCMCconf-class	MCMCconf-class
MCMCsuite	MCMCsuite
MCMCsuiteClass	MCMCsuiteClass-class
MCMCsuiteClass-class	MCMCsuiteClass-class
modelBaseClass	modelBaseClass-class
modelBaseClass-class	modelBaseClass-class
modelDefClass	modelDefClass-class
modelDefClass-class	modelDefClass-class
modelDefInfoClass-Class	nimble-internal
modelValues	modelValues
modelValuesBaseClass	modelValuesBaseClass-class
modelValuesBaseClass-class	modelValuesBaseClass-class
modelValuesConf	modelValuesConf
Multinomial	Multinomial
multinomial	Multinomial
Multivariate-t	Multivariate-t
multivariate-t	Multivariate-t
MultivariateNormal	MultivariateNormal
mvInfoClass-Class	nimble-internal
mvt	Multivariate-t
newModel	modelBaseClass-class
nfCompilationInfoClass-Class	nimble-internal
nfMethod	nfMethod
nfVar	nfVar
nfVar<-	nfVar
nimArray	nimArray
nimbleCode	nimbleCode
nimbleFunction	nimbleFunction
nimbleFunctionBase	nimbleFunctionBase-class
nimbleFunctionBase-class	nimbleFunctionBase-class
nimbleFunctionList	nimbleFunctionList-class
nimbleFunctionList-class	nimbleFunctionList-class
nimbleFunctionVirtual	nimbleFunctionVirtual
nimbleGraphClass-Class	nimble-internal
nimbleInternalFunctions	nimble-internal
nimbleModel	nimbleModel
nimbleOptions	nimbleOptions
nimbleProjectClass-Class	nimble-internal
nimbleUserNamespace	nimble-internal
nimCat	nimCat
nimCopy	nimCopy
nimDim	nimDim
nimEquals	nimble-math
nimInteger	nimInteger
nimMatrix	nimMatrix
nimNumeric	nimNumeric
nimPrint	nimPrint
nimStep	nimble-math
nimStop	nimStop
nimSwitch	nimble-math
nodeFunctions	nodeFunctions
numeric	nimNumeric
pexp_nimble	Exponential
phi	nimble-math
posteriorClass-Class	nimble-internal
posterior_predictive	samplers
pow	nimble-math
pqDefined	distributionInfo
printSamplers	MCMCconf-class
probit	nimble-math
pt_nonstandard	t
qexp_nimble	Exponential
qt_nonstandard	t
rankSample	rankSample
rcat	Categorical
RCfunctionCompileClass-Class	nimble-internal
RCfunInfoClass-Class	nimble-internal
rconstraint	Constraint
rdirch	Dirichlet
readBUGSmodel	readBUGSmodel
registerDistributions	registerDistributions
removeSamplers	MCMCconf-class
rename_MCMC_comparison_method	rename_MCMC_comparison_method
resetData	modelBaseClass-class
resetMonitors	MCMCconf-class
reshape_comparison_results	reshape_comparison_results
resize	resize
rexp_nimble	Exponential
rinterval	Interval
RMakeCustomModelClass-Class	nimble-internal
Rmatrix2mvOneVar	Rmatrix2mvOneVar
rmnorm_chol	MultivariateNormal
RmodelBaseClass	RmodelBaseClass-class
RmodelBaseClass-class	RmodelBaseClass-class
rmulti	Multinomial
rmvt_chol	Multivariate-t
rt_nonstandard	t
run.time	run.time
runMCMC	runMCMC
RW	samplers
rwish_chol	Wishart
RW_block	samplers
RW_llFunction	samplers
RW_llFunction_block	samplers
RW_multinomial	samplers
RW_PF	samplers
RW_PF_block	samplers
sampler	samplers
samplers	samplers
sampler_BASE	samplers
sampler_binary	samplers
sampler_crossLevel	samplers
sampler_ess	samplers
sampler_posterior_predictive	samplers
sampler_RW	samplers
sampler_RW_block	samplers
sampler_RW_llFunction	samplers
sampler_RW_llFunction_block	samplers
sampler_RW_multinomial	samplers
sampler_RW_PF	samplers
sampler_RW_PF_block	samplers
sampler_slice	samplers
setAndCalculate	setAndCalculate
setAndCalculateDiff	setAndCalculate
setAndCalculateOne	setAndCalculateOne
setData	modelBaseClass-class
setInits	modelBaseClass-class
setSamplers	MCMCconf-class
setSize	setSize
setThin	MCMCconf-class
setThin2	MCMCconf-class
setupCodeTemplateClass-Class	nimble-internal
setupOutputs	setupOutputs
simNodes	simNodes
simNodesMV	simNodesMV
simulate	nodeFunctions
singleModelValuesAccess	nimble-internal
singleModelValuesAccessClass-Class	nimble-internal
singleVarAccessClass	singleVarAccessClass-class
singleVarAccessClass-class	singleVarAccessClass-class
slice	samplers
t	t
testBUGSmodel	testBUGSmodel
topologicallySortNodes	modelBaseClass-class
updateMCMCcomparisonWithHighOrderESS	updateMCMCcomparisonWithHighOrderESS
valueInCompiledNimbleFunction	valueInCompiledNimbleFunction
values	values
values<-	values
varInfoClass-Class	nimble-internal
Wishart	Wishart
wishart	Wishart
[,CmodelValues-method	modelValuesBaseClass-class
[,CmodelValues-method,ANY,ANY	modelValuesBaseClass-class
[,CmodelValues-method,character,missing	modelValuesBaseClass-class
[,CmodelValues-method,character,missing,ANY-method	modelValuesBaseClass-class
[,distributionsClass-method	nimble-internal
[,modelValuesBaseClass-method	modelValuesBaseClass-class
[,numberedModelValuesAccessors-method	nimble-internal
[,numberedObjects-method	nimble-internal
[<-,CmodelValues-method	modelValuesBaseClass-class
[<-,modelValuesBaseClass-method	modelValuesBaseClass-class
[<-,numberedModelValuesAccessors-method	nimble-internal
[<-,numberedObjects-method	nimble-internal
[[,CmodelValues-method	modelValuesBaseClass-class
[[,CNumericList-method	nimble-internal
[[,conjugacyRelationshipsClass-method	nimble-internal
[[,distributionsClass-method	nimble-internal
[[,modelBaseClass-method	modelBaseClass-class
[[,nimPointerList-method	nimble-internal
[[,RNumericList-method	nimble-internal
[[<-,CmodelValues-method	modelValuesBaseClass-class
[[<-,CNumericList-method	nimble-internal
[[<-,modelBaseClass-method	modelBaseClass-class
[[<-,nimbleFunctionList-method	nimble-internal
[[<-,nimPointerList-method	nimble-internal
[[<-,RNumericList-method	nimble-internal
