EN2SY                   An list for mapping gene entre ids to symbol
                        ids
Gs2                     An subgraph of hub nodes
ad.matrix               An adjacency matrix of a sample graph...
calc.diffusionKernelp   Computing the Random Walk Kernel matrix of
                        network
classify.aep            Training and predicting using aepSVM (aepSVM)
                        classification methods
classify.frsvm          Training and predicting using FrSVM
classify.hubc           Training and predicting using hub nodes
                        classification methods
classify.pac            Training and predicting using PAC
                        classification methods
classify.stsvm          Training and predicting using stSVM
                        classification methods
cv.aep                  Cross validation for aepSVM (aepSVM)
cv.frsvm                Cross validation for FrSVM
cv.hubc                 Cross validation for hub nodes classification
cv.pac                  Cross validation for Pathway Activities
                        Classification(PAC)
cv.stsvm                Cross validation for smoothed t-statistic to
                        select significant top ranked differential
                        expressed genes
expr                    Two expression profile matrixs and their labels
getGeneRanking          Get gene ranking based on geneRank algorithm.
getGraphRank            Random walk kernel matrix smoothing t-statistic
netClass-package        An R package for network-Based microarray
                        Classification
pGeneRANK               GeneRANK
pOfHubs                 Computing p value of hubs using the permutation
                        test
predictAep              Predicting the test tdata using aep trained
                        model
predictFrsvm            Predicting the test data using frsvm trained
                        model
predictHubc             Predicting the test data using hubc trained
                        model
predictPac              Predicting the test data using pac trained
                        model
predictStsvm            Predicting the test data using stsvm trained
                        model
probeset2pathway        Generae a mean gene expression of genes of each
                        pathway matrix
probeset2pathwayTrain   Search CROG in training data
probeset2pathwayTst     Applied CROG to testing data
train.aep               Training the data using aep methods
train.frsvm             Training the data using frsvm method
train.hubc              Predicting the data using hub nodes
                        classification model
train.pac               Training the data using pac methods
train.stsvm             Training the data using stsvm methods
