Qscore                  Data quality control
anglePolygon            Internal angles of a polygon
anglecheck              Angle swept by a ray
boxplotSort             Median-ordered box plot
colorBar                Add a color bar
estimated_ancestral_va
                        Estimated Generalized Procrustes Analysis (GPA)
                        coordinates of ventral anchors of root ancestor
heatmapAnnot            Annotated heat map
hsplot                  Scatter plot with marginal histograms
liewi_gpa               Array data of Generalized Procrustes Analysis
                        (GPA) coordinates of dorsal anchors of
                        _Ligophorus liewi_ samples
ligophorus_shape        Shape variable data for 13 _Ligophorus_ species
ligophorus_tpsdata      Raw landmark coordinate data for 13
                        _Ligophorus_ species
ligotree                Maximum likelihood tree for 13 _Ligophorus_
                        species
matrix2list             Partitioning a matrix by row into objects of a
                        list
matrix2list.2           Partitioning a matrix by row labels into
                        objects of a list
pca2d                   Principal component analyis
pcloadhm                Heat map representation of principal component
                        loadings of shape variables
plotCircular            Circular plot
plotLM                  Scatter plot of Generalized Procrustes Analysis
                        (GPA) coordinates of anchor landmarks
polyVis                 Wireframe plot of monogenean anchor
procrustesFit           Generalized Procrustes Analysis
procrustesFit.2         Mass Extraction of Generalized Procrustes
                        Analysis Coordinates from Anchors
pwdist                  Pairwise Euclidean distances between landmarks
pwed_pd                 Physical distance between landmarks in ventral
                        and dorsal anchors of 13 _Ligophorus_ species
shapeEvo                Statistical test of deviation from directional
                        uniformity and estimation of average magnitude
                        of directional change
spcolmap                Species-color map
stdLM                   Standardization of landmark configuration by a
                        reference landmark
tpColorPlot2d           Color-annotated scatter plot with transparency
                        control
tpColorPlot3d           Color-annotated three-dimensional scatter plot
                        with transparency control
tpsRead                 Reading tps files into R
va_mean                 Mean Generalized Procrustes Analysis (GPA)
                        coordinates for ventral anchors of 13
                        _Ligophorus_ species
