AverageRankScore        Average-based rank score
ConditionSpecificGenes
                        Condition specifically expressed genes
ConvergenceDegree       Calculating covergence degree
PSOL_InitialNegativeSelection
                        Initial negative set selection for building
                        machine learning-based classification model
PSOL_NegativeExpansion
                        Negative expansion
PSOL_ResultExtraction   PSOL result extraction
classifier              Building machine learning-based classification
                        models
cross_validation        Cross validation method
data                    example data for mlDNA
exp2net                 Inferring transcriptional networks from gene
                        expression data
expFeatureMatrix        Expression-based feature matrix
geneRanker              Gene Ranking
interactionRemoval      interation-removal method
mlDNA-package           Machine Learning-based Differential Network
                        Analysis
netFeatureMatrix        Generating network feature matrix
optimalScore            Identifying optimal prediction score
plotROC                 Plotting receiver operating characteristic(ROC)
                        Curves
predictor               Prediction
randomSeed              Random seed generator
