SEIR                    Create a SEIR model
SEIR-class              Class '"SEIR"'
SIR                     Create a SIR model
SIR-class               Class '"SIR"'
SISe                    Create a SISe model
SISe-class              Class '"SISe"'
SISe3                   Create a SISe3 model
SISe3-class             Class '"SISe3"'
SISe3_sp                Create a SISe3_sp model
SISe3_sp-class          Class '"SISe3_sp"'
SISe_sp                 Create a 'SISe_sp' model
SISe_sp-class           Class '"SISe_sp"'
SimInf                  A Framework for Stochastic Disease Spread
                        Simulations
SimInf_model            Create a 'SimInf_model'
SimInf_model-class      Class '"SimInf_model"'
SimInf_mparse-class     Class '"SimInf_mparse"'
U                       Extract the number of individuals in each
                        compartment
U<-                     Set a template for where to write the U result
                        matrix
V                       Extract the continuous state variables
V<-                     Set a template for where to write the V result
                        matrix
demo_model              Generate a model for demonstration
distance_matrix         Create distance matrix
events_SEIR             Scheduled events example data for the 'SEIR'
                        model
events_SIR              Scheduled events example data for the 'SIR'
                        model
events_SISe3            Scheduled events example data
infected                Infected
init                    Init a 'SimInf_mparse' object
mparse                  Model parser
plot-methods            Plot 'scheduled_events'
prevalence              Prevalence
recovered               Recovered
run                     Run the SimInf stochastic simulation algorithm
run_outer               Run 'SimInf_model' on scaled parameters
scheduled_events        Create a '"scheduled_events"' object
scheduled_events-class
                        Class '"scheduled_events"'
show,SimInf_model-method
                        Brief summary of 'SimInf_model'
show,scheduled_events-method
                        Brief summary of 'scheduled_events'
summary,SimInf_model-method
                        Summary of 'SimInf_model'
summary,scheduled_events-method
                        Summary of 'scheduled_events'
susceptible             Susceptible
u0_SEIR                 Example data to initialize the 'SEIR' model
u0_SIR                  Example data to initialize the 'SIR' model
u0_SISe3                Example data to initialize a model
