# Detect gene-gene interactions using multifactor dimensionality reduction

## Documentation for package ‘MDR’ version 1.2

- DESCRIPTION file.

## Help Pages

MDR-package | Detect gene-gene interactions using multifactor dimensionality reduction
boot.error | Function to calculate a post-hoc prediction estimate of classification error adjusted for population prevalence using bootstrap resampling
compare | Function for internal use only ...
MDR | Detect gene-gene interactions using multifactor dimensionality reduction
mdr | Function to perform MDR on a dataset for a given set of loci
mdr.3WS | A function to perform MDR on a dataset using the three-way split for internal validation.
mdr.ca.adj | Function to calculate a post-hoc adjusted prediction estimate of classification accuracy, corrected for prospective data with previously estimated population prevalence
mdr.cv | A function to perform MDR on a dataset using k-fold cross-validation for internal validation.
mdr.hr | Function to estimate the accuracy of an MDR model given high-risk/low-risk status of genotype combinations
mdr1 | Sample data for MDR package for n=250, p=25
mdr2 | Sample data for MDR package for n=250, p=100
permute.mdr | Function to perform a permutation test after fitting an MDR model
plot.mdr | Plotting the results of an MDR model
predict.mdr | MDR model predictions
summary.mdr | Summarizing the results of an MDR model
test | Sample data for MDR package for n=1000, p=5000
train | Sample data for MDR package for n=1000, p=5000