Fine-Scale Population Analysis

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Documentation for package ‘FinePop’ version 1.3.0

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FinePop-package Fine-Scale Population Analysis
clip.genepop Remove designated markers from a GENEPOP file.
data.JSM An example dataset of GENEPOP format and frequency format.
DJ Jost's D
EBDJ Empirical Bayes estimator of Jost's D
EBFST Empirical Bayes estimator of Fst.
EBGstH Empirical Bayes estimator of Hedrick's G'st
GstH Hedrick's G'st
GstN Nei's Gst.
GstNC Nei and Chesser's Gst
read.frequency Create an allele (haplotype) frequency data object of populations from a frequency format file.
read.genepop Create a genotype data object of populations from a GENEPOP format file.
thetaWC.pair Weir and Cockerham's theta adapted for pairwise Fst.