Package: DeLorean
Title: Estimates Pseudotimes for Single Cell Expression Data
Author: John Reid <john.reid@mrc-bsu.cam.ac.uk>
Maintainer: John Reid <john.reid@mrc-bsu.cam.ac.uk>
Version: 1.2.4
Description: Implements the DeLorean model to estimate pseudotimes for
    single cell expression data. The DeLorean model uses a Gaussian process
    latent variable model to model uncertainty in the capture time of
    cross-sectional data.
Depends: R (>= 3.0.2), Rcpp (>= 0.12.0)
Imports: rstan (>= 2.12.1), dplyr (>= 0.4.3), reshape2 (>= 1.4),
        stringr (>= 0.6.2), ggplot2 (>= 1.0.0), MASS (>= 7.3), broom,
        coda, parallel, functional, kernlab, fastICA, seriation,
        memoise
Suggests: knitr (>= 1.8), knitcitations, rmarkdown, formatR, extrafont,
        testthat, svglite, fields, VGAM
License: MIT + file LICENSE
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-10-05 10:18:58 UTC; john
Repository: CRAN
Date/Publication: 2016-10-05 14:37:34
Built: R 3.2.5; ; 2017-04-20 08:50:46 UTC; windows
