CHAT-package	CHAT-package
A0SD.BAF	A0SD.BAF
A0SD.LRR	A0SD.LRR
ApproxBIC	ApproxBIC
CHAT	CHAT-package
Dist	Dist
DPfitSamples	DPfitSamples
findRobustPeaks	findRobustPeaks
getAGP	getAGP
getAmpDel	getAmpDel
getBAFmean	getBAFmean
getCanonicalLines	getCanonicalLines
getCCF	getCCF
getCoord	getCoord
getCosine	getCosine
getDiploidOrigin	getDiploidOrigin
getDistToPath	getDistToPath
getDPfit	getDPfit
getGrid	getGrid
getHets	getHets
getKmeans	getKmeans
getLOH	getLOH
getOrigin	getOrigin
getPara	getPara
getPara.sAGP	getPara.sAGP
getPeaks	getPeaks
getPermutation	getPermutation
getPloidy	getPloidy
getsAGP	getsAGP
getSampleAGP	getSampleAGP
getSampleCCF	getSampleCCF
getSeg	getSeg
getSegChr	getSegChr
getSegChr.CBS	getSegChr.CBS
getSegPurity	getSegPurity
getSumDist	getSumDist
getUnifiedMap	getUnifiedMap
is.nearCP	is.nearCP
mcmc	mcmc
MergeBreakPointsByChr	MergeBreakPointsByChr
NormalizeLRR	NormalizeLRR
plotBAFLRR	plotBAFLRR
plotIdentifiableZone	plotIdentifiableZone
prior	prior
SampleNMM	SampleNMM
