Computing F-Statistics from Pool-Seq Data

Documentation for package ‘poolfstat’ version 1.1.1

poolfstat-package	PoolFstat
computeFST	Compute FST from Pool-Seq data
computePairwiseFSTmatrix	Compute pairwise population population FST matrix (and possibly all pairwise SNP-specific FST)
genobaypass2pooldata	Convert BayPass read count and haploid pool size input files into a pooldata object
genoselestim2pooldata	Convert SelEstim read count input files into a pooldata object
is.pooldata	Check pooldata objects
make.example.files	Create example files
pooldata	An S4 class to represent a Pool-Seq data set.
pooldata-class	An S4 class to represent a Pool-Seq data set.
pooldata.subset	Create a subset of the pooldata object that contains Pool-Seq data
pooldata2genobaypass	Convert a pooldata object into BayPass input files.
pooldata2genoselestim	Convert a pooldata object into SelEstim input files.
poolfstat	PoolFstat
popsync2pooldata	Convert Popoolation Sync files into a pooldata object
vcf2pooldata	Convert a VCF file into a pooldata object.