A B C D F G I L M N O P R S T U V Z misc
| prioritizr-package | 'prioritizr' |
| A | Optimization problem methods |
| A-method | Optimization problem methods |
| add_absolute_targets | Add absolute targets |
| add_absolute_targets-method | Add absolute targets |
| add_binary_decisions | Add binary decisions |
| add_boundary_penalties | Add boundary penalties |
| add_connectivity_penalties | Add connectivity penalties |
| add_connectivity_penalties-method | Add connectivity penalties |
| add_contiguity_constraints | Add contiguity constraints |
| add_contiguity_constraints-method | Add contiguity constraints |
| add_cuts_portfolio | Add Bender's cuts portfolio |
| add_default_decisions | Add default decisions |
| add_default_solver | Default solver |
| add_feature_contiguity_constraints | Add feature contiguity constraints |
| add_feature_contiguity_constraints-method | Add feature contiguity constraints |
| add_feature_weights | Add feature weights |
| add_feature_weights-method | Add feature weights |
| add_gurobi_solver | Add a _Gurobi_ solver |
| add_locked_in_constraints | Add locked in constraints |
| add_locked_in_constraints-method | Add locked in constraints |
| add_locked_out_constraints | Add locked out constraints |
| add_locked_out_constraints-method | Add locked out constraints |
| add_loglinear_targets | Add targets using log-linear scaling |
| add_lpsymphony_solver | Add a SYMPHONY solver with 'lpsymphony' |
| add_lsymphony_solver | Add a SYMPHONY solver with 'lpsymphony' |
| add_mandatory_allocation_constraints | Add mandatory allocation constraints |
| add_mandatory_allocation_constraints-method | Add mandatory allocation constraints |
| add_manual_bounded_constraints | Add manually specified bounds constraints |
| add_manual_bounded_constraints-method | Add manually specified bounds constraints |
| add_manual_locked_constraints | Add manually specified locked constraints |
| add_manual_locked_constraints-method | Add manually specified locked constraints |
| add_manual_targets | Add manual targets |
| add_manual_targets-method | Add manual targets |
| add_max_cover_objective | Add maximum coverage objective |
| add_max_features_objective | Add maximum feature representation objective |
| add_max_phylo_div_objective | Add maximum phylogenetic diversity objective |
| add_max_phylo_end_objective | Add maximum phylogenetic endemism objective |
| add_max_phylo_objective | Add maximum phylogenetic diversity objective |
| add_max_utility_objective | Add maximum utility objective |
| add_min_set_objective | Add minimum set objective |
| add_min_shortfall_objective | Add minimum shortfall objective |
| add_neighbor_constraints | Add neighbor constraints |
| add_neighbor_constraints-method | Add neighbor constraints |
| add_pool_portfolio | Add a pool portfolio |
| add_proportion_decisions | Add proportion decisions |
| add_relative_targets | Add relative targets |
| add_relative_targets-method | Add relative targets |
| add_rsymphony_solver | Add a SYMPHONY solver with 'Rsymphony' |
| add_semicontinuous_decisions | Add semi-continuous decisions |
| add_shuffle_portfolio | Add a shuffle portfolio |
| ArrayParameter | Array parameter prototype |
| ArrayParameter-class | Array parameter prototype |
| array_parameters | Array parameters |
| as | Coerce object to another object |
| as.Id | Coerce object to another object |
| as.Id.character | Coerce object to another object |
| as.list-method | Manipulate tibbles |
| as.list.OptimizationProblem | Convert 'OptimizationProblem' to list |
| as.list.Parameters | Coerce object to another object |
| as.list.Zones | Coerce object to another object |
| binary_matrix_parameter | Matrix parameters |
| binary_parameter | Scalar parameters |
| binary_parameter_array | Array parameters |
| binary_stack | Binary stack |
| boundary_matrix | Boundary matrix |
| boundary_matrix.default | Boundary matrix |
| boundary_matrix.Raster | Boundary matrix |
| boundary_matrix.SpatialLines | Boundary matrix |
| boundary_matrix.SpatialPoints | Boundary matrix |
| boundary_matrix.SpatialPolygons | Boundary matrix |
| branch_matrix | Branch matrix |
| branch_matrix.default | Branch matrix |
| branch_matrix.phylo | Branch matrix |
| category_layer | Category layer |
| category_vector | Category vector |
| category_vector.data.frame | Category vector |
| category_vector.matrix | Category vector |
| Collection | Collection prototype |
| Collection-class | Collection prototype |
| col_ids | Optimization problem methods |
| col_ids-method | Optimization problem methods |
| compile | Compile a problem |
| compile.ConservationProblem | Compile a problem |
| compressed_formulation | Optimization problem methods |
| compressed_formulation-method | Optimization problem methods |
| connected_matrix | Connected matrix |
| connected_matrix.default | Connected matrix |
| connected_matrix.Raster | Connected matrix |
| connected_matrix.SpatialLines | Connected matrix |
| connected_matrix.SpatialPoints | Connected matrix |
| connected_matrix.SpatialPolygons | Connected matrix |
| connectivity_matrix | Connectivity matrix |
| connectivity_matrix-method | Connectivity matrix |
| ConservationModifier | Conservation problem modifier prototype |
| ConservationModifier-class | Conservation problem modifier prototype |
| ConservationProblem | Conservation problem class |
| ConservationProblem-class | Conservation problem class |
| Constraint | Constraint prototype |
| Constraint-class | Constraint prototype |
| constraints | Conservation problem constraints |
| Decision | Decision prototype |
| Decision-class | Decision prototype |
| decisions | Specify the type of decisions |
| distribute_load | Distribute load |
| fast_extract | Fast extract |
| fast_extract-method | Fast extract |
| feature_abundances | Feature abundances |
| feature_abundances.ConservationProblem | Feature abundances |
| feature_names | Feature names |
| feature_names-method | Feature names |
| feature_representation | Feature representation |
| feature_representation-method | Feature representation |
| get_number_of_threads | Number of threads for data processing |
| Id | Identifier |
| integer_parameter | Scalar parameters |
| integer_parameter_array | Array parameters |
| intersecting_units | Find intersecting units |
| intersecting_units-method | Find intersecting units |
| irreplaceability | Irreplaceability |
| is | Is it? |
| is.Id | Is it? |
| is.parallel | Is parallel? |
| is.Waiver | Is it? |
| lb | Optimization problem methods |
| lb-method | Optimization problem methods |
| loglinear_interpolation | Log-linear interpolation |
| marxan_boundary_data_to_matrix | Convert _Marxan_ boundary data to a matrix format |
| marxan_problem | _Marxan_ conservation problem |
| marxan_problem.character | _Marxan_ conservation problem |
| marxan_problem.data.frame | _Marxan_ conservation problem |
| marxan_problem.default | _Marxan_ conservation problem |
| matrix_parameters | Matrix parameters |
| MiscParameter | Miscellaneous parameter prototype |
| MiscParameter-class | Miscellaneous parameter prototype |
| misc_parameter | Miscellaneous parameter |
| modelsense | Optimization problem methods |
| modelsense-method | Optimization problem methods |
| ncell | Optimization problem methods |
| ncell-method | Optimization problem methods |
| ncol | Optimization problem methods |
| ncol-method | Optimization problem methods |
| ncol-method | Manipulate tibbles |
| new_id | Identifier |
| new_optimization_problem | Optimization problem |
| new_waiver | Waiver |
| nrow | Optimization problem methods |
| nrow-method | Optimization problem methods |
| nrow-method | Manipulate tibbles |
| number_of_features | Number of features |
| number_of_features-method | Number of features |
| number_of_planning_units | Number of planning units |
| number_of_planning_units-method | Number of planning units |
| number_of_total_units | Number of total units |
| number_of_total_units-method | Number of total units |
| number_of_zones | Number of zones |
| number_of_zones-method | Number of zones |
| numeric_matrix_parameter | Matrix parameters |
| numeric_parameter | Scalar parameters |
| numeric_parameter_array | Array parameters |
| obj | Optimization problem methods |
| obj-method | Optimization problem methods |
| Objective | Objective prototype |
| Objective-class | Objective prototype |
| objectives | Problem objective |
| OptimizationProblem | Optimization problem class |
| OptimizationProblem-class | Optimization problem class |
| OptimizationProblem-methods | Optimization problem methods |
| parallel | Number of threads for data processing |
| Parameter | Parameter class |
| Parameter-class | Parameter class |
| Parameters | Parameters class |
| parameters | Parameters |
| Parameters-class | Parameters class |
| penalties | Conservation problem penalties |
| Penalty | Penalty prototype |
| Penalty-class | Penalty prototype |
| pipe | Pipe operator |
| Portfolio | Portfolio prototype |
| Portfolio-class | Portfolio prototype |
| portfolios | Solution portfolios |
| pproto | Create a new 'pproto' object |
| predefined_optimization_problem | Predefined optimization problem |
| presolve_check | Presolve check |
| presolve_check.ConservationProblem | Presolve check |
| presolve_check.OptimizationProblem | Presolve check |
| print-method | |
| print.ArrayParameter | |
| print.ConservationModifier | |
| print.ConservationProblem | |
| print.Id | |
| print.OptimizationProblem | |
| print.ScalarParameter | |
| print.Solver | |
| print.Zones | |
| prioritizr | 'prioritizr' |
| problem | Conservation planning problem |
| problem-method | Conservation planning problem |
| proportion_parameter | Scalar parameters |
| proportion_parameter_array | Array parameters |
| rarity_weighted_richness | Rarity weighted richness |
| rarity_weighted_richness-method | Rarity weighted richness |
| replacement_cost | Replacement cost |
| replacement_cost-method | Replacement cost |
| rhs | Optimization problem methods |
| rhs-method | Optimization problem methods |
| rij_matrix | Feature by planning unit matrix |
| rij_matrix-method | Feature by planning unit matrix |
| row_ids | Optimization problem methods |
| row_ids-method | Optimization problem methods |
| run_calculations | Run calculations |
| ScalarParameter | Scalar parameter prototype |
| ScalarParameter-class | Scalar parameter prototype |
| scalar_parameters | Scalar parameters |
| sense | Optimization problem methods |
| sense-method | Optimization problem methods |
| set_number_of_threads | Number of threads for data processing |
| show | Show |
| show-method | Show |
| simulate_cost | Simulate cost data |
| simulate_data | Simulate data |
| simulate_species | Simulate species habitat suitability data |
| sim_data | Simulated conservation planning data |
| sim_features | Simulated conservation planning data |
| sim_features_zones | Simulated conservation planning data |
| sim_locked_in_raster | Simulated conservation planning data |
| sim_locked_out_raster | Simulated conservation planning data |
| sim_phylogeny | Simulated conservation planning data |
| sim_pu_lines | Simulated conservation planning data |
| sim_pu_points | Simulated conservation planning data |
| sim_pu_polygons | Simulated conservation planning data |
| sim_pu_raster | Simulated conservation planning data |
| sim_pu_zones_polygons | Simulated conservation planning data |
| sim_pu_zones_stack | Simulated conservation planning data |
| solve | Solve |
| solve-method | Solve |
| Solver | Solver prototype |
| Solver-class | Solver prototype |
| solvers | Problem solvers |
| Target | Target prototype |
| Target-class | Target prototype |
| targets | Targets |
| tee | Tee operator |
| tibble-methods | Manipulate tibbles |
| ub | Optimization problem methods |
| ub-method | Optimization problem methods |
| vtype | Optimization problem methods |
| vtype-method | Optimization problem methods |
| Zones | Management zones |
| zones | Management zones |
| Zones-class | Management zones |
| ZonesCharacter | Management zones |
| ZonesRaster | Management zones |
| zone_names | Zone names |
| zone_names-method | Zone names |
| %>% | Pipe operator |
| %T>% | Tee operator |