Generates Various Protein Descriptors for Machine Learning Algorithms

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Documentation for package ‘ProteinDescriptors’ version 0.1.0

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DiscreteBlosum Discrete blosum descriptor.
DiscreteSequentialBlosumTwoParts Discrete sequential blosum descriptor with split number=2.
DiscreteSequentialSparseFiveParts Discrete sequential sparse descriptor with split number=5.
DiscreteSequentialSparseFourParts Discrete sequential sparse descriptor with split number=4.
DiscreteSequentialSparseThreeParts Discrete sequential sparse descriptor with split number=3.
DiscreteSequentialSparseTwoParts Discrete sequential sparse descriptor with split number=2.
DiscreteSequentialTdTwoParts Discrete sequential 3D descriptor with split number=2.
DiscreteSparse Discrete sparse descriptor.
DiscreteTd Discrete 3D descriptor.
IncrementalDiscreteSparse Incremental discrete sparse descriptor.
LastFirstDiscreteSparse Last first discrete sparse descriptor.
SequentialBlosum Sequential blosum descriptor.
SequentialDiscreteBlosum Sequential discrete blosum descriptor with step size=2.
SequentialDiscreteSparse Sequential discrete sparse descriptor with step size=2.
SequentialDiscreteTd Sequential discrete 3D descriptor with step size=2.
SequentialSparse Sequential sparse descriptor.
SequentialTd Sequential 3D descriptor.
ShiftedDiscreteSparse Discrete sparse descriptor.