geneNetBP-package |
Belief Propagation in Genotype-Phenotype Networks |
absorb.dbn |
Absorb evidence and propagate beliefs in a genotype-phenotype network |
absorb.gnbp |
Absorb evidence and propagate beliefs in a genotype-phenotype network |
fit.dbn |
Fit a Conditional Gaussian Bayesian Network or Discrete Bayesian Network to QTL data |
fit.gnbp |
Fit a Conditional Gaussian Bayesian Network or Discrete Bayesian Network to QTL data |
gen.evidence |
Generate a sequence of evidence for a continuous node in a conditional gaussian bayesian network. |
geneNetBP |
Belief Propagation in Genotype-Phenotype Networks |
hdl |
Mus Musculus HDL QTL data from Leduc et. al. (2012) |
mouse |
Mus Musculus Kidney eQTL data from Hageman et. al. (2011) |
plot.dbn |
Plot a Genotype-Phenotype Network |
plot.dbnfit |
Plot a Genotype-Phenotype Network |
plot.gnbp |
Plot a Genotype-Phenotype Network |
plot.gpfit |
Plot a Genotype-Phenotype Network |
toy |
Toy example dataset |
yeast |
Saccharomyces Cerevisiae eQTL data from Kruglak et. al. (2005) |