Statistical Tools for Filebacked Big Matrices


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Documentation for package ‘bigstatsr’ version 0.9.1

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bigstatsr-package bigstatsr: Statistical Tools for Filebacked Big Matrices
%*%-method Product with a matrix
add_code256 Class FBM.code256
asPlotlyText Plotly text
as_FBM Class FBM
AUC AUC
AUCBoot AUC
bigstatsr bigstatsr: Statistical Tools for Filebacked Big Matrices
big_apply Split-Apply-Combine
big_colstats Standard univariate statistics
big_copy Copy a Filebacked Big Matrix
big_cor Correlation
big_counts Counts
big_cprodMat Cross-product with a matrix
big_cprodVec Cross-product with a vector
big_crossprodSelf Crossprod
big_parallelize Split-parApply-Combine
big_prodMat Product with a matrix
big_prodVec Product with a vector
big_randomSVD Randomized partial SVD
big_read Read a file
big_scale Some scaling functions
big_spLinReg Sparse linear regression
big_spLogReg Sparse logistic regression
big_SVD Partial SVD
big_tcrossprodSelf Tcrossprod
big_transpose Transposition
big_univLinReg Column-wise linear regression
big_univLogReg Column-wise logistic regression
big_write Write a file
block_size Determine a correct value for the block.size parameter
crossprod-method Cross-product with a matrix
crossprod-method Crossprod
diag-method Methods for the FBM class
dim-method Methods for the FBM class
Extract Create an Implementation of [ For Custom Matrix-Like Types
FBM Class FBM
FBM-class Class FBM
FBM-methods Methods for the FBM class
FBM.code256 Class FBM.code256
FBM.code256-class Class FBM.code256
FBM.code256-methods Methods for the FBM.code256 class
FBM.code256_RC Class FBM.code256
FBM_RC Class FBM
get_beta Combine sets of coefficients
length-method Methods for the FBM class
nb_cores Recommended number of cores to use
pasteLoc Get coordinates
plot.big_sp_list Plot method
plot.big_SVD Plot method
plot.mhtest Plot method
plus Add
predict.big_sp Predict method
predict.big_sp_list Predict method
predict.big_SVD Scores of PCA
predict.mhtest Predict method
Replace Create an Implementation of [<- For Custom Matrix-Like Types
sub_bk Replace extension 'bk'
summary.big_sp_list Summary method
tcrossprod-method Cross-product with a matrix
tcrossprod-method Tcrossprod
theme_bigstatsr Theme ggplot2
typeof-method Methods for the FBM class
without_downcast_warning Temporarily disable downcast warning
[-method Methods for the FBM class
[-method Methods for the FBM.code256 class
[<--method Methods for the FBM class