| as.data.frame-method | S4 class containing clonal assignments and summary data |
| ExampleDb | Example database |
| hierarchicalClones | Hierarchical clustering-based method for partitioning Ig sequences into clones. |
| identicalClones | Identical clustering-based method for partitioning Ig sequences into clones. |
| plot-method | S4 class containing clonal assignments and summary data |
| plotCloneSummary | Plot clonal clustering summary |
| print-method | S4 class containing clonal assignments and summary data |
| scoper | The SCOPer package |
| ScoperClones | S4 class containing clonal assignments and summary data |
| ScoperClones-class | S4 class containing clonal assignments and summary data |
| ScoperClones-method | S4 class containing clonal assignments and summary data |
| spectralClones | Spectral clustering-based method for partitioning Ig sequences into clones. |
| summary-method | S4 class containing clonal assignments and summary data |