| anova.gllvm | Analysis Of Deviance for gllvm |
| coefplot | Plot covariate coefficients and confidence intervals |
| coefplot.gllvm | Plot covariate coefficients and confidence intervals |
| confint.gllvm | Confidence intervals for model parameters |
| getLV | Extract latent variables |
| getLV.gllvm | Extract latent variables |
| getPredictErr | Extract prediction errors for latent variables from gllvm object |
| getPredictErr.gllvm | Extract prediction errors for latent variables from gllvm object |
| getResidualCor | Extract residual correlations from gllvm object |
| getResidualCor.gllvm | Extract residual correlations from gllvm object |
| getResidualCov | Extract residual covariance matrix from gllvm object |
| getResidualCov.gllvm | Extract residual covariance matrix from gllvm object |
| gllvm | Generalized Linear Latent Variable Models |
| logLik.gllvm | Log-likelihood of gllvm |
| microbialdata | Microbial community data |
| ordiplot | Plot latent variables from gllvm model |
| ordiplot.gllvm | Plot latent variables from gllvm model |
| plot.gllvm | Plot Diagnostics for an gllvm Object |
| predict | Predict Method for gllvm Fits |
| predict.gllvm | Predict Method for gllvm Fits |
| predictLVs | Predict latent variables for gllvm Fits |
| predictLVs.gllvm | Predict latent variables for gllvm Fits |
| randomCoefplot | Plot random slope coefficients |
| randomCoefplot.gllvm | Plot random slope coefficients |
| residuals.gllvm | Dunn-Smyth residuals for gllvm model |
| simulate | Simulate data from gllvm fit |
| simulate.gllvm | Simulate data from gllvm fit |
| sim_bacteria | Simulated bacteria data |
| summary.gllvm | Summarizing gllvm model fits |