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| chromoR-package | Analysis of chromosomal interactions data (Hi-C data) |
| buildCIM | Builds Chromosomal Interactions Maps |
| chromoR | Analysis of chromosomal interactions data (Hi-C data) |
| compareCIM | Compares 2 CIMs |
| correctCIM | Corrects a chromosomal interactions map (CIM) |
| correctPairCIM | Corrects a pairwise CIM |
| imr90.1 | A corrected CIM of replicate 1 of IMR90, for chromosomes 1 and 2 |
| imr90.1.obs | A non-corrected CIM of replicate 1 of IMR90, for chromosomes 1 and 2 |
| imr90.2 | A CIM of replicate 2 of IMR90, for chromosomes 1 and 2 |
| seg | A segmentation for imr90.1 and imr90.2 CIMs |
| seg.imr90.obs | A segmentation for imr90.1.obs CIM |
| segmentCIM | Segments a 1D contact profile (1D CIM) |