| apmsWAPP-package | Pre- and Postprocessing for AP-MS data analysis |
| apmsWAPP | Pre- and Postprocessing for AP-MS data analysis |
| int2mat | Format transformation of spectral counts |
| mat2int | Format transformation of spectral counts |
| norm.inttable | Normalization of spectral count data |
| saint_permF | Pre- and Postprocessing for AP-MS data analysis using SAINT |
| tspm_apms | Workflow for AP-MS data analysis using TSPM |
| varFilter | Filtering of AP-MS data |