| RClone-package | RClone |
| agg_index | Aggregation of clones |
| agg_index_core | Aggregation of clones |
| autocorrelation | Spatial Autocorrelation |
| autocorrelation_core | Spatial Autocorrelation |
| clonal_index | Indices for clonal data |
| clonal_index_core | Indices for clonal data |
| clonal_sub | Clonal Subrange |
| clonal_sub_core | Clonal Subrange |
| convert_GC | File conversion into RClone files |
| coord_posidonia | Posidonia coordinates |
| corresp_loci | Listing unique alleles |
| edge_effect | Edge Effect |
| edge_effect_core | Edge Effect |
| export_genclone_arlequin | export data file to Adegenet, Genetix and Arlequin |
| export_genclone_genetix | export data file to Adegenet, Genetix and Arlequin |
| export_genclone_genind | export data file to Adegenet, Genetix and Arlequin |
| Fis | Fis |
| Fis_core | Fis |
| freq_finder | Allelic Frequencies |
| freq_RR | Allelic Frequencies |
| freq_RR_core | Allelic Frequencies |
| GenClone | Summary function of RClone package |
| genclone | Summary function of RClone package |
| GenClone_core | Summary function of RClone package |
| genclone_core | Summary function of RClone package |
| genet_dist | Genetic distance |
| genet_dist_core | Genetic distance |
| genet_dist_sim | Genetic distance |
| genet_dist_sim_core | Genetic distance |
| graph_autocorrelation | Spatial Autocorrelation |
| graph_genet_dist | Genetic distance |
| id_clonal | Aggregation of clones |
| id_clonal_MLL | Aggregation of clones |
| id_clonal_mod | Clonal Subrange |
| id_clonal_mod_MLL | Clonal Subrange |
| infile | Infile GenClone style file |
| kinship | Loiselle and Ritland kinship coefficients |
| kinship_Loiselle | Loiselle and Ritland kinship coefficients |
| kinship_Loiselle_core | Loiselle and Ritland kinship coefficients |
| kinship_Ritland | Loiselle and Ritland kinship coefficients |
| kinship_Ritland_core | Loiselle and Ritland kinship coefficients |
| list_all | Listing unique alleles |
| list_all_obj | Listing unique alleles |
| list_all_obj_core | Listing unique alleles |
| list_all_tab | Listing unique alleles |
| list_all_tab2 | Listing unique alleles |
| list_all_tab2_core | Listing unique alleles |
| list_all_tab_core | Listing unique alleles |
| MLG_list | Table of MLG (MultiLocus Genotypes) |
| MLG_list_core | Table of MLG (MultiLocus Genotypes) |
| MLG_tab | Table of MLG (MultiLocus Genotypes) |
| MLG_tab_core | Table of MLG (MultiLocus Genotypes) |
| MLL_generator | Clonal Lineage Generation |
| MLL_generator2 | Clonal Lineage Generation |
| MLL_generator2_core | Clonal Lineage Generation |
| MLL_generator_core | Clonal Lineage Generation |
| nearest_unit | Aggregation of clones |
| Pareto_index | Pareto index |
| Pareto_index_core | Pareto index |
| pgen | Probability of a Genotype |
| pgen_core | Probability of a Genotype |
| pgen_Fis | Probability of a Genotype |
| pgen_Fis_core | Probability of a Genotype |
| popsim | Posidonia |
| popsimgen | Summary function of RClone package |
| posidonia | Posidonia |
| psex | Probability of originating from distinct sexual events |
| psex_core | Probability of originating from distinct sexual events |
| psex_Fis | Probability of originating from distinct sexual events |
| psex_Fis_core | Probability of originating from distinct sexual events |
| RClone | RClone |
| RClone_quickmanual | RClone |
| red_MLL | Spatial Autocorrelation |
| red_MLL_mod | Spatial Autocorrelation |
| resvigncont | Results contained in vignette Quick Manual |
| resvigncont2 | Results contained in vignette Quick Manual |
| sample_loci | Sample Loci or Units |
| sample_loci_core | Sample Loci or Units |
| sample_LU | Sample Loci or Units |
| sample_units | Sample Loci or Units |
| sample_units_core | Sample Loci or Units |
| sort_all | Sorting alleles |
| transcript_GC | Transcript GenClone files |
| zostera | Zostera Dataset |