Inference Using Simulation


[Up] [Top]

Documentation for package ‘Infusion’ version 1.4.1

Help Pages

Infusion-package Inference using simulation
add_reftable Create or augment a list of simulated distributions of summary statistics
add_simulation Create or augment a list of simulated distributions of summary statistics
boundaries-attribute Discrete probability masses and NA/NaN/Inf in distributions of summary statistics.
class:dMixmod Internal S4 classes.
class:NULLorChar Internal S4 classes.
class:NULLorNum Internal S4 classes.
confint Compute confidence intervals by (profile) summary likelihood
confint.SLik Compute confidence intervals by (profile) summary likelihood
confint.SLikp Compute confidence intervals by (profile) summary likelihood
confint.SLik_j Compute confidence intervals by (profile) summary likelihood
densb Saved computations of inferred log-likelihoods
densv Saved computations of inferred log-likelihoods
dMixmod Internal S4 classes.
dMixmod-class Internal S4 classes.
example_raw Workflow for originally described method
example_reftable Workflow for method with reference table
get_projection Learn a projection method for statistics and applies it
get_projector Learn a projection method for statistics and applies it
handling_NAs Discrete probability masses and NA/NaN/Inf in distributions of summary statistics.
infer_logLs Infer log Likelihoods using simulated distributions of summary statistics
infer_logL_by_GLMM Infer log Likelihoods using simulated distributions of summary statistics
infer_logL_by_Hlscv.diag Infer log Likelihoods using simulated distributions of summary statistics
infer_logL_by_mclust Infer log Likelihoods using simulated distributions of summary statistics
infer_logL_by_Rmixmod Infer log Likelihoods using simulated distributions of summary statistics
infer_SLik_joint Infer a (summary) likelihood surface from a simulation table
infer_surface Infer a (summary) likelihood or tail probability surface from inferred likelihoods
infer_surface.logLs Infer a (summary) likelihood or tail probability surface from inferred likelihoods
infer_surface.tailp Infer a (summary) likelihood or tail probability surface from inferred likelihoods
infer_tailp Infer log Likelihoods using simulated distributions of summary statistics
Infusion Inference using simulation
Infusion.getOption Infusion options settings
Infusion.options Infusion options settings
init_grid Define starting points in parameter space.
MSL Maximum likelihood from an inferred likelihood surface
multi_binning Multivariate histogram
neuralNet Learn a projection method for statistics and applies it
NULLorChar Internal S4 classes.
NULLorChar-class Internal S4 classes.
NULLorNum Internal S4 classes.
NULLorNum-class Internal S4 classes.
parallel Infusion options settings
plot.SLik Plot SLik or SLikp objects
plot.SLikp Plot SLik or SLikp objects
plot.SLik_j Plot SLik or SLikp objects
plot1Dprof Plot likelihood profiles
plot2Dprof Plot likelihood profiles
profile Compute profile summary likelihood
profile.SLik Compute profile summary likelihood
profile.SLik_j Compute profile summary likelihood
project Learn a projection method for statistics and applies it
project.character Learn a projection method for statistics and applies it
project.default Learn a projection method for statistics and applies it
refine Refine estimates iteratively.
refine.default Refine estimates iteratively.
refine.SLik Refine estimates iteratively.
refine.SLikp Refine estimates iteratively.
refine.SLik_j Refine estimates iteratively.
rparam Sample the parameter space
sample_volume Sample the parameter space
saved_seed Saved computations of inferred log-likelihoods